Software

OrthoFinder: Highly accurate orthologous sequence groups made easy.

TransRate: Reference free quality assesment of de novo assembled transcriptomes.

MergeAlign: Building better multiple sequence alignments.

DendroBLAST: a webserver for accurate phylogenetic inference in the absence of multiple sequence alignments.

SLaP mapper: a webserver for identifying and quantifying spliced-leader addition and poly-adenylation sites in kinetoplastid genomes.

Conditional Orthology Assignment: a webserver for identifying homologous transcripts from a whole de novo transcriptome assembly.