LOCUS pDex577_Y 6759 bp ds-DNA circular 28-FEB-2010 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers primer_bind complement(2605..2624) /label=T7 /ApEinfo_fwdcolor=#d6d4ff /ApEinfo_revcolor=#fbc0fc primer_bind 757..774 /label=SP6 /ApEinfo_fwdcolor=#d6d4ff /ApEinfo_revcolor=#fbc0fc primer_bind complement(3405..3424) /label=pEnT-seq2 /ApEinfo_fwdcolor=#d6d4ff /ApEinfo_revcolor=#fbc0fc repeat_region 13..544 /label=177-targeting /ApEinfo_fwdcolor=#d6d4ff /ApEinfo_revcolor=#fbc0fc sig_peptide complement(1514..1543) /label=TY epitope /ApEinfo_fwdcolor=#d6394b /ApEinfo_revcolor=#d6394b sig_peptide complement(2270..2299) /label=TY epitope(1) /ApEinfo_label=TY epitope /ApEinfo_fwdcolor=#d6394b /ApEinfo_revcolor=#d6394b rep_origin 5859..6541 /label=ColE1 origin /ApEinfo_fwdcolor=gray50 /ApEinfo_revcolor=gray50 CDS complement(join(1550..1572,1574..2269)) /label=YFP /ApEinfo_fwdcolor=yellow /ApEinfo_revcolor=yellow CDS 5102..5761 /label=AmpR /ApEinfo_fwdcolor=#d8b6b0 /ApEinfo_revcolor=#d8b6b0 promoter 3102..3392 /label=rDNA promoter /ApEinfo_fwdcolor=cornflower blue /ApEinfo_revcolor=cornflower blue CDS 3521..3892 /label=BLEO /ApEinfo_fwdcolor=#0064ff /ApEinfo_revcolor=#0064ff 5'UTR complement(2304..2396) /label=EP1 5' /ApEinfo_fwdcolor=#bfbfbf /ApEinfo_revcolor=#bfbfbf 3'UTR 3952..4234 /label=Actin 3' /ApEinfo_fwdcolor=#bfbfbf /ApEinfo_revcolor=#bfbfbf 3'UTR complement(812..1504) /label=Aldolase 3' /ApEinfo_fwdcolor=#bfbfbf /ApEinfo_revcolor=#bfbfbf protein_bind complement(2429..2447) /label=Tet-O /ApEinfo_fwdcolor=#b6897e /ApEinfo_revcolor=#b6897e protein_bind complement(2450..2468) /label=Tet-O(1) /ApEinfo_label=Tet-O /ApEinfo_fwdcolor=#b6897e /ApEinfo_revcolor=#b6897e protein_bind complement(2581..2599) /label=Tet-O(2) /ApEinfo_label=Tet-O /ApEinfo_fwdcolor=#b6897e /ApEinfo_revcolor=#b6897e terminator 2813..2952 /label=T7 terminator /ApEinfo_fwdcolor=#937644 /ApEinfo_revcolor=#937644 ORIGIN 1 GAATTCGAGC TCTTTAATGG TCCTTATACG AACGAATATT AAACAATGCG CAGTTAACGC 61 TATTATACAC AATAACTTTT AATGTCTGCC ATATTAATTA CAAGTGTGCA ACATTAAATA 121 CAAGTGTGTA ACGTTAATTT GCAAGTTTGA AACAATGTTC TTTAGTGTTT AATGTGTGCA 181 ACAAAGCTAT TTAATGGTCC TTATACGAAC GAATATTAAA CAATGCGCAG TTAACGCTAT 241 TATACACAAT AACTTTTAAT GTGTGCCATA TTAATTACGG ATCGCGGCCG CGATCCGTGT 301 GCAACATTAA ATACAAGTGT GTAACATTAA TTTGCAAGTT TGCAACAATG TTCTTTAGTG 361 TTTAATGGGT GCAACAAAGC TATTTAATGG TCCTTATACG AACGAATATT AAACAATCCG 421 CAGTTAACGC TATTATACAC AATAACTTTT AATGTGTCCC ATATTAATTA CAAGTGTGCA 481 ACATTAAATA CAAGTGTGTA ACATTAATTT GCAAGTTTGC AACAATGTTC TTTAGTGTTT 541 AATGGGTACC ATTGGTTCGC TGACCATTTC CGGGTGCGGG ACGGCGTTAC CAGAAACTCA 601 GAAGGTTCGT CCAACCAAAC CGACTCTGAC GGCAGTTTAC GAGAGAGATG ATAGGGTCTG 661 CTTCAGTAAG CCAGATGCTA CACAATTAGG CTTGTACATA TTGTCGTTAG AACGCGGCTA 721 CAATTAATAC ATAACCTTAT GTATCATACA CATACGATTT AGGTGACACT ATAGAATACA 781 AGCTAGCCTG CATGCCTGCA GGGGAAGGAA ACCAACTTGT AGTGGCAATG AAACAGTAAG 841 AGGGTATCAT ATTCAAGTCA AATCAATTTA CCACTGCCAA TGAGGCCTCC CTATCCATCC 901 TCCAACTCTT TGATTTCGTC AGTATGTTCA CTTATTTGGT GCATCAAAAT ATTTTCGGAT 961 AATTATGCCT GGTGTATCCC CACCCTTAAT GAGCGCTTTC GTGTCCTTCA TTTTTTCAAC 1021 AACAACAACA CACACACACA CACACACTTA TTTATTCCTC TCATACACAC AAAAGAGCGT 1081 ATTAAAACCA AAAAAAAACA TATATTCGTT TTTTACCACT TTTCAAAAGG TAATTATATA 1141 TTCCTTTTTA ACCATTTACA GGTCTCAGAC GGAAGGTGCA CACGCCTATG AGAAACGGGG 1201 CACCsGGCAG CTCCGCACGG TGACTGCGGG AGGCAGCAAG ATATGATCCC ATTGATGTAC 1261 CACGCGTGCT CCAAAGCAAA CATGCAGATT CCCCATGCAC CAACGAGACA ACCAAGCAAG 1321 CATATAAAGC CCCTTCACAT TATTTATCCT CTTAAACATA AGATATCCCC CCATTTTCTT 1381 CTTTTACATC ATCCCCCCTT CCTAACCAAC CTGCAGGCGC ACCTCCCTGC TGTGCCATCA 1441 GATTACTCCG GGAACCTTTC CACGGAAAAG ACACGAGACA AGGGAAAAGC CAACTAAATG 1501 GGCAGGATCC TTAGTCAAGT GGATCTTGGT TAGTATGGAC CTCTctagaC TTGTACAGCT 1561 CGTCCATGCC GAgAGTGATC CCGGCGGCGG TCACGAACTC CAGCAGGACC ATGTGATCGC 1621 GCTTCTCGTT GGGGTCTTTG CTCAGGGCGG ACTGGTAGCT CAGGTAGTGG TTGTCGGGCA 1681 GCAGCACGGG GCCGTCGCCG ATGGGGGTGT TCTGCTGGTA GTGGTCGGCG AGCTGCACGC 1741 TGCCGTCCTC GATGTTGTGG CGGATCTTGA AGTTCACCTT GATGCCGTTC TTCTGCTTGT 1801 CGGCCATGAT ATAGACGTTG TGGCTGTTGT AGTTGTACTC CAGCTTGTGC CCCAGGATGT 1861 TGCCGTCCTC CTTGAAGTCG ATGCCCTTCA GCTCGATGCG GTTCACCAGG GTGTCGCCCT 1921 CGAACTTCAC CTCGGCGCGG GTCTTGTAGT TGCCGTCGTC CTTGAAGAAG ATGGTGCGCT 1981 CCTGGACGTA GCCTTCGGGC ATGGCGGACT TGAAGAAGTC GTGCTGCTTC ATGTGGTCGG 2041 GGTAGCGGGC GAAGCACTGC AGGCCGTAGC CGAAGGTGGT CACGAGGGTG GGCCAGGGCA 2101 CGGGCAGCTT GCCGGTGGTG CAGATGAACT TCAGGGTCAG CTTGCCGTAG GTGGCATCGC 2161 CCTCGCCCTC GCCGGACACG CTGAACTTGT GGCCGTTTAC GTCGCCGTCC AGCTCGACCA 2221 GGATGGGCAC CACCCCGGTG AACAGCTCCT CGCCCTTGCT CACACTAGTG TCAAGTGGAT 2281 CTTGGTTAGT ATGGACCTCC ATAAGCTTGT GAATTTTACT TTTTGGTGTA ATTGAAGTCT 2341 TCAAGTTGAA AAAAATGGGG AAAAGGAAAA AAAACTCGAA GGCGCGTGCA GCCCGGGACG 2401 AGAACATGTT AAACTCAGTA CTCAGGGATC TCTATCACTG ATAGGGAGAT CTCTATCACT 2461 GATAGGGAGA TCCCTACCCG ATAACCCCTA TTTTCAATGC ACGCCCACCC AGAGACACGG 2521 AATAGCATAA AACAACCCCA TCACTGCCAC AAAATGGACT CGAGGGGGGG CCCGGGGAGA 2581 TCTCTATCAC TGATAGGGAG ATCTCCCTAT AGTGAGTCGT ATTAATCAGC CGGTGTGTTG 2641 CCAAAGACAT TCTGTATAAT TTTCCAACTA CCCTAACCTG ATTCACTCAT CGTTGAGCAT 2701 TTGTTCTTCT ACTTTTTGAC CGCAAGTGTC GTTATTAGTA TTCGGTCCTC CTCGACATGA 2761 TTGAAATAGT GCCACCAGTT GTGTTTGATG CGTTTGTTAT CTATGCAGTA TTCTGCAGGC 2821 TGCTAACAAA GCCCGAAAGG AAGCTGAGTT GGCTGCTGCC ACCGCTGAGC AATAACTAGC 2881 ATAACCCCTT GGGGCCTCTA AACGGGTCTT GAGGGGTTTT TTGCTGAAAG GAGAACTATA 2941 TCCGGATAGG GCTGCTAACA AAGCCCGAAA GGAAGCTGAG TTGGCTGCTG CCACCGCTGA 3001 GCAATAACTA GCATAACCCC TTGGGGCCTC TAAACGGGTC TTGAGGGGTT TTTTGCTGAA 3061 AGGAGAACTA TATCCGGATT GGGCCCCTGC AGGCATGCAA GCTAGCTTTC CACCCAGCGC 3121 GGGTGCATTC TGGCTCTTAT ATATACTTAT TGTCATGACA GAGTATATTG TACTGTGTTG 3181 ATAAGGGACG GGTAACTGTA TTGAAGAGCC GATGCTTTTG ACATGTTAGA TATAATATGT 3241 TTTATTGTAA AGTCAATACA ACACACAATA GGATAATAAT GATAAAGTTA AAAAAGTATA 3301 TATAGTAATA GAAATATATC TTATATAGGA AAGATTAAGC AGTAAAAGTA GCGCTTACGG 3361 CGTACGGAGC AGGAGAGCAA CTGACCGCTC TCAGACCCGG GCACAGCAAG GTCTTCTGAA 3421 ATTCATGTTT TTTTTTTTTT TACTCTGCAT TGCAGTCTCC GCTCTTATTT AGTTTTGCTT 3481 TACGTAAGGT CTCGTTGCTG CCATAAAATA AGCTATCACC ATGGCCAAGT TGACCAGTGC 3541 CGTTCCGGTG CTCACCGCGC GCGACGTCGC CGGAGCGGTC GAGTTCTGGA CCGACCGGCT 3601 CGGGTTCTCC CGGGACTTCG TGGAGGACGA CTTCGCCGGT GTGGTCCGGG ACGACGTGAC 3661 CCTGTTCATC AGCGCGGTCC AGGACCAGGT GGTGCCGGAC AACACCCTGG CCTGGGTGTG 3721 GGTGCGCGGC CTGGACGAGC TGTACGCCGA GTGGTCGGAG GTCGTGTCCA CGAACTTCCG 3781 GGACGCCTCC GGGCCGGCCA TGACCGAGAT CGGCGAGCAG CCGTGGGGGC GGGAGTTCGC 3841 CCTGCGCGAC CCGGCCGGCA ACTGCGTGCA CTTCGTGGCC GAGGAGCAGG ACTGACCGAC 3901 GCCGACCAAC ACCGCCGGTC CGACGCGGCC CGACGGGTCC GAGGCCTCGG AGATCCTAAC 3961 ACCGGGTTGT GTGGCCAAAA TTGTTCTGTA GTCGCTGTGA GTTGACACGG CTAGTGCTTA 4021 TGATTTTCCT CGCGTGTGGT GCCTGTACTC AGCCCTATGC CTTATTTGCA ACACATTTAC 4081 GTACAGCGCA CAAGAGAAGA GAAGATCACT TGAAGATAAT AAATATAGGG TTGTAGGCAT 4141 CTTGTTTAAC TCAAATTTTC TCGTCTTGGT GTGTCGACAT GATTGAAATA GTGCCACCAG 4201 TTGTGTTTGA TGCGTTTGTT ATCTATGCAG TATTCCTAGC CAGATCCTCT ACGCCGGACG 4261 CATCGTGGCC GGCATCACCG GCGCCACAGG TGCGGTTGCT GGCGCCTATA TCGCCGACAT 4321 CACCGATGGG GAAGATCGGG CTCGCCACTT CGGGCTCATG AGCGCTTGTT TCGGCGTGGG 4381 TATGGTGGCA GGCCCCGTGG CCGGGGGACT GTTGGGCGCC ATCTCCTTGC ACCATTCCTT 4441 GCGGCGGCGG TGCTCAACGG CCTCAACCTA CTACTGGGCT GCTTCCTAAT GCAGGAGTCG 4501 CATAAGGGAG AGCGTCGAAT GGTGCACTCT CAGTACAATC TGCTCTGATG CCGCATAGTT 4561 AAGCCAGCCC CGACACCCGC CAACACCCGC TGACGCGCCC TGACGGGCTT GTCTGCTCCC 4621 GGCATCCGCT TACAGACAAG CTGTGACCGT CTCCGGGAGC TGCATGTGTC AGAGGTTTTC 4681 ACCGTCATCA CCGAAACGCG CGAGACGAAA GGGCCTCGTG ATACGCCTAT TTTTATAGGT 4741 TAATGTCATG ATAATAATGG TTTCTTAGAC GTCAGGTGGC ACTTTTCGGG GAAATGTGCG 4801 CGGAACCCCT ATTTGTTTAT TTTTCTAAAT ACATTCAAAT ATGTATCCGC TCATGAGACA 4861 ATAACCCTGA TAAATGCTTC AATAATATTG AAAAAGGAAG AGTATGAGTA TTCAACATTT 4921 CCGTGTCGCC CTTATTCCCT TTTTTGCGGC ATTTTGCCTT CCTGTTTTTG CTCACCCAGA 4981 AACGCTGGTG AAAGTAAAAG ATGCTGAAGA TCAGTTGGGT GCACGAGTGG GTTACATCGA 5041 ACTGGATCTC AACAGCGGTA AGATCCTTGA GAGTTTTCGC CCCGAAGAAC GTTTTCCAAT 5101 GATGAGCACT TTTAAAGTTC TGCTATGTGG CGCGGTATTA TCCCGTATTG ACGCCGGGCA 5161 AGAGCAACTC GGTCGCCGCA TACACTATTC TCAGAATGAC TTGGTTGAGT ACTCACCAGT 5221 CACAGAAAAG CATCTTACGG ATGGCATGAC AGTAAGAGAA TTATGCAGTG CTGCCATAAC 5281 CATGAGTGAT AACACTGCGG CCAACTTACT TCTGACAACG ATCGGAGGAC CGAAGGAGCT 5341 AACCGCTTTT TTGCACAACA TGGGGGATCA TGTAACTCGC CTTGATCGTT GGGAACCGGA 5401 GCTGAATGAA GCCATACCAA ACGACGAGCG TGACACCACG ATGCCTGTAG CAATGGCAAC 5461 AACGTTGCGC AAACTATTAA CTGGCGAACT ACTTACTCTA GCTTCCCGGC AACAATTAAT 5521 AGACTGGATG GAGGCGGATA AAGTTGCAGG ACCACTTCTG CGCTCGGCCC TTCCGGCTGG 5581 CTGGTTTATT GCTGATAAAT CTGGAGCCGG TGAGCGTGGG TCTCGCGGTA TCATTGCAGC 5641 ACTGGGGCCA GATGGTAAGC CCTCCCGTAT CGTAGTTATC TACACGACGG GGAGTCAGGC 5701 AACTATGGAT GAACGAAATA GACAGATCGC TGAGATAGGT GCCTCACTGA TTAAGCATTG 5761 GTAACTGTCA GACCAAGTTT ACTCATATAT ACTTTAGATT GATTTAAAAC TTCATTTTTA 5821 ATTTAAAAGG ATCTAGGTGA AGATCCTTTT TGATAATCTC ATGACCAAAA TCCCTTAACG 5881 TGAGTTTTCG TTCCACTGAG CGTCAGACCC CGTAGAAAAG ATCAAAGGAT CTTCTTGAGA 5941 TCCTTTTTTT CTGCGCGTAA TCTGCTGCTT GCAAACAAAA AAACCACCGC TACCAGCGGT 6001 GGTTTGTTTG CCGGATCAAG AGCTACCAAC TCTTTTTCCG AAGGTAACTG GCTTCAGCAG 6061 AGCGCAGATA CCAAATACTG TTCTTCTAGT GTAGCCGTAG TTAGGCCACC ACTTCAAGAA 6121 CTCTGTAGCA CCGCCTACAT ACCTCGCTCT GCTAATCCTG TTACCAGTGG CTGCTGCCAG 6181 TGGCGATAAG TCGTGTCTTA CCGGGTTGGA CTCAAGACGA TAGTTACCGG ATAAGGCGCA 6241 GCGGTCGGGC TGAACGGGGG GTTCGTGCAC ACAGCCCAGC TTGGAGCGAA CGACCTACAC 6301 CGAACTGAGA TACCTACAGC GTGAGCTATG AGAAAGCGCC ACGCTTCCCG AAGGGAGAAA 6361 GGCGGACAGG TATCCGGTAA GCGGCAGGGT CGGAACAGGA GAGCGCACGA GGGAGCTTCC 6421 AGGGGGAAAC GCCTGGTATC TTTATAGTCC TGTCGGGTTT CGCCACCTCT GACTTGAGCG 6481 TCGATTTTTG TGATGCTCGT CAGGGGGGCG GAGCCTATGG AAAAACGCCA GCAACGCGGC 6541 CTTTTTACGG TTCCTGGCCT TTTGCTGGCC TTTTGCTCAC ATGTTCTTTC CTGCGTTATC 6601 CCCTGATTCT GTGGATAACC GTATTACCGC CTTTGAGTGA GCTGATACCG CTCGCCGCAG 6661 CCGAACGACC GAGCGCAGCG AGTCAGTGAG CGAGGAAGCG GAAGAGCGCC CAATACGCAA 6721 ACCGCCTCTC CCCGCGCGTT GGCCGATTCA TTAATGCAG //